Search Sequences

There are three sequence search types: BLAST (Basic Local Alignment Search Tool): Search for proteins as well as nucleotides using a set of local alignment algorithms (BLASTn, MegaBlast, BLASTp, tBLASTn, BLASTx); CDR (Complementarity-Determining Region): Search for antibody and t-cell receptors; and Motif: Search for short patterns in DNA, RNA, or proteins with queries enabled for additional variability.

  • Find Sequences - BLAST

    Find sequences that match your query, which can be a protein/nucleotide string or a .txt/.fasta file. Enter or copy and paste a protei...

  • Find Sequences - CDR

    Find sequences that match your query, which can be a protein string or a .txt/.fasta file. Enter, copy and paste, or upload a file fo...

  • Find Sequences - Motif

    Find sequences that match your query, which can be a protein/nucleotide string. Enter or copy and paste a protein/nucleotide string. S...